Information for 12-GCTCCTCAAAGCC (Motif 21)

A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C G T A G C T A C T G C G T A A C T G A C T G G T C A A C T G A T G C
p-value:1e-10
log p-value:-2.447e+01
Information Content per bp:1.935
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 25.9bp
Average Position of motif in Background65.9 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCTCCTCAAAGCC
--ACATCAAAGG-
 A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTCCTCAAAGCC-
AAAGATCAAAGGAA
 A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTCCTCAAAGCC
--ACWTCAAAGG-
 A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTCCTCAAAGCC-
--ACATCAAAGGNA
 A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C A C G T
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTCCTCAAAGCC
GCTCGTAAAAA--
 A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCTCAAAGCC---
NNNAGATCAAAGGANNN
 A C G T A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTCCTCAAAGCC
GCTCCG-------
 A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCTCCTCAAAGCC-
----NTCAAGGTCA
 A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCTCCTCAAAGCC---
TATAGATCAAAGGAAAA
 A C G T A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCTCCTCAAAGCC
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A T C G A G T C C A G T A G T C A G T C A C G T A G T C C T G A C G T A C G T A A C T G A G T C G T A C
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T