Information for 7-GGGATGCSCGGCTGCC (Motif 15)

A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C G T C A A C T G A T G C A G T C A T C G A T C G A C T G A G T C C G T A A C G T A G T C A T G C A G T C
p-value:1e-12
log p-value:-2.861e+01
Information Content per bp:1.847
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 26.2bp
Average Position of motif in Background76.7 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGATGCSCGGCTGCC
NNGCNCTGCGCGGC----
 A C G T A C G T A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGGATGCSCGGCTGCC
NGTCACGCTTGGCTGC-
 A C G T A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGATGCSCGGCTGCC
GTCATGCHTGRCTGS-
 A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGATGCSCGGCTGCC
-KGTTGCTAGGMAACA
 A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C
A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PAX5/MA0014.2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGATGCSCGGCTGCC---
GTCACGCTTGGCTGCNCNN
 A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C A C G T A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGGATGCSCGGCTGCC-
---CTGGCAGNCTGCCA
 A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGGATGCSCGGCTGCC
---ATGCCCACC----
 A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGGATGCSCGGCTGCC
NNNNATGCGGGTNNNN-
 A C G T A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GGGATGCSCGGCTGCC
--TATGCGGGTA----
 A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C
A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GGGATGCSCGGCTGCC
TGGAATGT---------
 A C G T A C T G A T C G A C T G G T C A A C G T A C T G A G T C A T C G A T G C A C T G A T C G G T A C A C G T A C T G A G T C A T G C
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T