Information for 18-TTCAGTACTG (Motif 28)

C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G
Reverse Opposite:
A T G C G C T A C T A G A C G T G T C A A T G C G A C T C T A G G T C A G C T A
p-value:1e-12
log p-value:-2.869e+01
Information Content per bp:1.674
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets62.8 +/- 28.1bp
Average Position of motif in Background21.5 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGTACTG----
NATTTAAGTACTTANNA
 A C G T A C G T A C G T C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTCAGTACTG----
CTTTAAGTACTTAATG
 A C G T A C G T C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCAGTACTG
TTAAGTGCTT
 C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGTACTG----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

POL002.1_INR/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTCAGTACTG
-TCAGTCTT-
 C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TTCAGTACTG
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGTACTG
GTTTCACTTCCG
 A C G T A C G T C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGTACTG
CTYRAGTGSY-
 A C G T C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCAGTACTG-----
CGAACAGTGCTCACTAT
 A C G T A C G T C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCAGTACTG
TTAAGTGC--
 C G A T A C G T G A T C C G T A A T C G A C G T G T C A G A T C C G A T A T C G
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T