Information for 17-AGGRCAGSCCWSG (Motif 26)

C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G
Reverse Opposite:
G A T C A T G C C G T A C T A G A C T G T A G C A T G C C G A T T A C G G A C T G T A C A G T C G A C T
p-value:1e-14
log p-value:-3.287e+01
Information Content per bp:1.613
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets49.2 +/- 28.1bp
Average Position of motif in Background53.0 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AGGRCAGSCCWSG
-----AGGCCTNG
 C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGGRCAGSCCWSG
-----AGGCCTAG
 C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGRCAGSCCWSG
CAAAGGCGTGGCCAG-
 A C G T A C G T A C G T C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGGRCAGSCCWSG-----
----CAGGCCNNGGCCNN
 C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGRCAGSCCWSG
TRAGGTCA-------
 A C G T A C G T C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGRCAGSCCWSG
-GGAAANCCCC--
 C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGRCAGSCCWSG
-GGAAATTCCC--
 C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGGRCAGSCCWSG-
NNNGGGGCGCCCCCNN
 A C G T A C G T C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGRCAGSCCWSG
-GGAAATCCCC--
 C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGGRCAGSCCWSG
CAAAGGTCAG------
 A C G T A C G T A C G T C T G A C T A G A C T G C T G A A T G C C G T A A T C G A T C G A G T C G A T C G C A T T A C G C T A G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T