Information for 6-CACTCATCCACCA (Motif 11)

G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A
Reverse Opposite:
C A G T A C T G A C T G C G A T C T A G A T C G G T C A C A G T A C T G C G T A C T A G A C G T C A T G
p-value:1e-23
log p-value:-5.505e+01
Information Content per bp:1.697
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets44.2 +/- 25.1bp
Average Position of motif in Background61.0 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC2/MA0891.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACTCATCCACCA
-CCTAATCCGC--
 G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CACTCATCCACCA
--TTAATCCC---
 G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CACTCATCCACCA
-GCTAATCCCC--
 G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CACTCATCCACCA
-----ATCCAC--
 G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CACTCATCCACCA
-CTTAATCCC---
 G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACTCATCCACCA-
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CACTCATCCACCA
-GCTAATCC----
 G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACTCATCCACCA-
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACTCATCCACCA
--ATAATCCC---
 G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACTCATCCACCA--
AGGCTAATCCCCAANG
 A C G T G T A C G T C A G A T C C G A T G T A C G T C A A C G T T A G C A G T C G C T A T A G C G T A C G C T A A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G