Information for 3-CATGTTACACAGATCA (Motif 4)

G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T C T A G C G T A A C G T T A G C A C G T A C T G A G C T A T C G C G A T C T G A C T G A G T A C C G T A A C G T A C T G
p-value:1e-13
log p-value:-3.171e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.2 +/- 28.8bp
Average Position of motif in Background18.6 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CATGTTACACAGATCA
AATATACATGTAAAACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CATGTTACACAGATCA-------
------TCACCCATCAATAAACA
 G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CATGTTACACAGATCA
GKVTCADRTTWC--------
 A C G T A C G T A C G T A C G T G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CATGTTACACAGATCA
GTCATGTGACC-------
 A C G T A C G T G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CATGTTACACAGATCA---
--------ANAGATAAGAA
 G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CATGTTACACAGATCA
AAAATACATGTAATACT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CATGTTACACAGATCA
AATATACATGTAAAATT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CATGTTACACAGATCA---
NGAGGTCANNGAGTTCANNN
 A C G T G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

NFIL3/MA0025.1/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CATGTTACACAGATCA
-ANGTTACATAA----
 G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A
A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.48
Offset:8
Orientation:forward strand
Alignment:CATGTTACACAGATCA----
--------AAAGATCAAAGG
 G T A C C G T A C G A T A C T G A G C T G A C T C G T A A T G C T C G A A G T C C G T A A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G