Information for 17-AGATAAAGGCTTT (Motif 23)

C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A A T C G A G T C G T A C A C G T A G C T A C G T T C G A A C G T A G T C A C G T
p-value:1e-7
log p-value:-1.649e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif22.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.2 +/- 15.7bp
Average Position of motif in Background49.5 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGATAAAGGCTTT
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGATAAAGGCTTT
AAAACAAAGG----
 A C G T C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGATAAAGGCTTT
-AACAAAGG----
 C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGATAAAGGCTTT
AAAGATCAAAGGGTT
 A C G T A C G T C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGATAAAGGCTTT
-RACAAWGG----
 C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGATAAAGGCTTT
AAAACAATGG----
 A C G T C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGATAAAGGCTTT
AGATAAGA-----
 C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGATAAAGGCTTT
AAAGATCAAAGG---
 A C G T A C G T C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGATAAAGGCTTT
AGATAASR-----
 C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGATAAAGGCTTT
RAACAATGGN---
 C G T A C T A G C G T A A C G T G T C A C T G A C G T A A C T G A C T G A T G C A C G T A G C T A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T