Information for 9-CACAGAGCTGMACYAT (Motif 15)

A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
Reverse Opposite:
C T G A A C G T C T A G C T A G A C G T A C G T T A G C C G T A A T C G A G T C A C G T G A T C A C G T A C T G A C G T A T C G
p-value:1e-8
log p-value:-2.026e+01
Information Content per bp:1.795
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.3 +/- 26.6bp
Average Position of motif in Background21.0 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CACAGAGCTGMACYAT
-ACAAAG---------
 A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACAGAGCTGMACYAT
VRRACAAWGG--------
 A C G T A C G T A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACAGAGCTGMACYAT
-ACAAAGGNBCCT---
 A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CACAGAGCTGMACYAT
AAAACAAAGG--------
 A C G T A C G T A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CACAGAGCTGMACYAT
GGAACAAAGR--------
 A C G T A C G T A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACAGAGCTGMACYAT
AACAAAGG--------
 A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CACAGAGCTGMACYAT
RACAAWGG--------
 A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACAGAGCTGMACYAT
CGAACAGTGCTCACTAT-
 A C G T A C G T A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CACAGAGCTGMACYAT
--AACAGCTG------
 A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CACAGAGCTGMACYAT
AAACCACAGAN---------
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C C G T A C A T G C G T A A C T G A T G C A C G T A C T G G T A C G T C A A G T C A G C T C G T A A G C T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T