Information for 14-GGTCAGGGTCACG (Motif 18)

A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G
Reverse Opposite:
A T G C A T C G A C G T A C T G C G T A A G T C G T A C A G T C A G C T A C T G C G T A A G T C A G T C
p-value:1e-7
log p-value:-1.642e+01
Information Content per bp:1.913
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 31.1bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGGTCACG
AGGTCAAGGTCA--
 A C G T A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGGTCACG
AGGTCAAGGTCA--
 A C G T A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGGTCACG--
CGCGCCGGGTCACGTA
 A C G T A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGGGTCACG
AAGTTCAAGGTCAGC
 A C G T A C G T A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGGTCACG--
AGAGCGGGGTCAAGTA
 A C G T A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGTCAGGGTCACG
--TCAAGGTCAN-
 A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGTCAGGGTCACG
-BTCAAGGTCA--
 A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTCAGGGTCACG--
GGTCANNGTGACCTN
 A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGTCAGGGTCACG--
CAGGTCACCGTGACCTT
 A C G T A C G T A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGTCAGGGTCACG
--TCAAGGTCATA
 A C T G A C T G A C G T A G T C C T G A A C T G A C T G A C T G A C G T A G T C C G T A A T G C A T C G
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A