Information for 5-AAGGTCAAGA (Motif 23)

C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A
Reverse Opposite:
A G C T A T G C G C A T A C G T A T C G T C G A G T A C A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.848
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif99.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets34.9 +/- 27.0bp
Average Position of motif in Background52.0 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAAGA
TCAAGGTCAT--
 A C G T A C G T C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTCAAGA
TCAAGGTCAN--
 A C G T A C G T C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAAGA-
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.81
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAAGA--
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AAGGTCAAGA
CAAGGHCANV-
 A C G T C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AAGGTCAAGA
AAGGTCAC--
 C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAAGA-
CAAAGGTCAAGGG
 A C G T A C G T C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAAGA
TCAAGGTCATA-
 A C G T A C G T C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGTCAAGA
ANGNAAAGGTCA---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAAGA-
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G A C T G A G C T A T G C C G T A C G T A T A C G C T G A A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G