Information for 3-TCCGAGGAGCCTGGCA (Motif 9)

A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A G T C A G T C A G C T A G T C A C T G C T A G C G T A
p-value:1e-9
log p-value:-2.138e+01
Information Content per bp:1.881
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 30.1bp
Average Position of motif in Background35.9 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCGAGGAGCCTGGCA
NTNNNAGGAGTCTCNTN
 A C G T A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:TCCGAGGAGCCTGGCA-
---------CTTGGCAA
 A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TCCGAGGAGCCTGGCA
----CGGAGC------
 A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCCGAGGAGCCTGGCA---
----RGSMTBCTGGGAAAT
 A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCCGAGGAGCCTGGCA----
----NGTAGGTTGGCATNNN
 A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TCCGAGGAGCCTGGCA--
---------NTTGGCANN
 A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TCCGAGGAGCCTGGCA-
-------GGTCTGGCAT
 A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

KLF13/MA0657.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCCGAGGAGCCTGGCA-
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.53
Offset:10
Orientation:forward strand
Alignment:TCCGAGGAGCCTGGCA
----------TTGGCA
 A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TCCGAGGAGCCTGGCA-
--------GGTTGGCAT
 A C G T A G T C G T A C A C T G C T G A A C T G A C T G C G T A A C T G A G T C A G T C A C G T A C T G A C T G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T