Information for 2-CCAGCCASGCGCGGGC (Motif 6)

A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C G A T C T A C G A T G C T C A G A T G C A T G C A C G T A C T G A T C G A G T C C G A T A T C G A C T G
p-value:1e-9
log p-value:-2.223e+01
Information Content per bp:1.793
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets39.4 +/- 20.7bp
Average Position of motif in Background43.6 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAGCCASGCGCGGGC-------
---GCCASCAGGGGGCGCYVNNG
 A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCAGCCASGCGCGGGC--
----ACATGCCCGGGCAT
 A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCAGCCASGCGCGGGC----
-TGGCCACCAGGGGGCGCTA
 A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCAGCCASGCGCGGGC-----
-TGGCCACCAGGTGGCACTNT
 A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCCASGCGCGGGC
TCCCAGMCRAGCCCC---
 A C G T A C G T A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCAGCCASGCGCGGGC
SCAGYCADGCATGAC-
 A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CCAGCCASGCGCGGGC--
-------TGCGTGGGCGT
 A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCAGCCASGCGCGGGC
CCAGACAG--------
 A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CCAGCCASGCGCGGGC--
-------TGCGCAGGCGC
 A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCAGCCASGCGCGGGC---
-----ANTGCGGGGGCGGN
 A G T C A T G C C G T A A C T G A T G C A G T C G T C A A T C G A T C G A G T C A T C G A T G C C T A G A C T G A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A