Information for 11-TCCTGCATGCAGG (Motif 20)

A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A C T G A C T G C T G A
p-value:1e-6
log p-value:-1.382e+01
Information Content per bp:1.914
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.7 +/- 11.6bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCCTGCATGCAGG
--TTGCGTGCVA-
 A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TCCTGCATGCAGG---
-----CATGCGGGTAC
 A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCCTGCATGCAGG
ACATCCTGNT------
 A C G T A C G T A C G T A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TCCTGCATGCAGG--
-----TATGCGGGTA
 A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCCTGCATGCAGG--
---TGCCCTNGGGCA
 A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCCTGCATGCAGG--
---TGCCCNGGGGCA
 A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TCCTGCATGCAGG-----
------SDGCAGGTGCNS
 A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCCTGCATGCAGG
---TGCGTG----
 A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCCTGCATGCAGG--
---TGCCCTNGGGCA
 A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCCTGCATGCAGG
CACTTCCTGT-------
 A C G T A C G T A C G T A C G T A G C T A G T C A G T C A C G T A C T G A G T C T C G A A G C T A C T G A G T C C G T A A C T G A C T G
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T