Information for 7-GTTTTTCCGAGGC (Motif 12)

A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G C T A G T C A T C G C T A G C G T A C G T A C G T A C T G A G T C A A G T C
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.4 +/- 17.8bp
Average Position of motif in Background45.8 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTTTTCCGAGGC
-NTTTTACGAGN-
 A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTCCGAGGC--
ANATTTTACGAGNNNN
 A C G T A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTCCGAGGC--
NAATTTTACGAGNTNN
 A C G T A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTTTTCCGAGGC
-NTTTTACGACT-
 A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C
A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTTTTCCGAGGC
-NTTTTACGAC--
 A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C
A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTTTTCCGAGGC
-NTTTTACGACC-
 A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTTTTTCCGAGGC
--HTTTCCCASG-
 A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTTCCGAGGC--
NNNATTTTACGACNNTN
 A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXC10/MA0905.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTTTTTCCGAGGC
-NTTTTACGAC--
 A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C
A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTTTTTCCGAGGC
-ATTTTCCATT--
 A C T G A C G T A G C T A C G T A C G T A C G T A G T C A T G C A C T G C T G A A C T G A C T G A G T C
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T