Information for 6-CGGAGTGACCTCT (Motif 9)

A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C T G
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 17.8bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:CGGAGTGACCTCT
-----TGACCYCT
 A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CGGAGTGACCTCT
----GTGACCTT-
 A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CGGAGTGACCTCT
-----TGACCTYA
 A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGAGTGACCTCT----
-NNNGTGACCTTTGNNN
 A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGGAGTGACCTCT----
-NNNNTGACCTTTNNNN
 A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CGGAGTGACCTCT-
----CTGACCTTTG
 A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CGGAGTGACCTCT----
-----TGACCTTTNCNT
 A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CGGAGTGACCTCT
AGGNCANNGTGACCT--
 A C G T A C G T A C G T A C G T A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CGGAGTGACCTCT
-----TGACCT--
 A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGGAGTGACCTCT----
NNNNTTGACCCCTNNNN
 A G T C T C A G A C T G C G T A A C T G A C G T A C T G G T C A A G T C A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C