Information for 1-CCACCAGAGGGCRGMG (Motif 1)

T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G
Reverse Opposite:
A G T C C A T G A T G C G A T C A C T G G T A C A G T C G T A C A G C T T A G C C A G T C T A G T A C G C A G T A C T G A C T G
p-value:1e-39
log p-value:-9.187e+01
Information Content per bp:1.661
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif118.0
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets60.2 +/- 19.2bp
Average Position of motif in Background48.8 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGAGGGCRGMG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGAGGGCRGMG---
GCCASCAGGGGGCGCYVNNG
 A C G T T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGAGGGCRGMG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCACCAGAGGGCRGMG
---CAAGATGGCGGC-
 T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCACCAGAGGGCRGMG
TCACCTCTGGGCAG--
 T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCACCAGAGGGCRGMG
--AACAGATGGC----
 T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCACCAGAGGGCRGMG--
-NNNAAGGGGGCGGGNNN
 T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCACCAGAGGGCRGMG-
-----RGKGGGCGGAGC
 T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCACCAGAGGGCRGMG
---CAAGATGGCGGC-
 T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGAGGGCRGMG
CCCCCCCGGGGGNN---
 A C G T T G A C A G T C G T C A A T G C G A T C G T C A A T C G C T G A C A T G A C T G A C T G G T A C C T A G A T C G G T A C T C A G
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T A C G T