Information for 11-CATGGATTAG (Motif 32)

A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A G C T A G T C A G T C C G T A A G C T A C T G
p-value:1e-5
log p-value:-1.296e+01
Information Content per bp:1.944
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 23.8bp
Average Position of motif in Background56.7 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:CATGGATTAG-
---GGATTAGC
 A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CATGGATTAG-
-NNGGATTAGN
 A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CATGGATTAG-
TTGCCCGGATTAGG
 A C G T A C G T A C G T A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CATGGATTAG-
-VRGGATTARN
 A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CATGGATTAG-
--GGGATTANN
 A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CATGGATTAG
--GGGATTAA
 A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CATGGATTAG
--RGGATTAR
 A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CATGGATTAG-
-GNGGATTAGN
 A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CATGGATTAG
-NGGGATTA-
 A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

PH0035.1_Gsc/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CATGGATTAG-----
NNAAGGGATTAACGANT
 A C G T A C G T A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T