Information for 12-AAATTACCAAATCCAT (Motif 24)

T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
Reverse Opposite:
C T G A G A C T A T C G T A C G G C T A A G C T C G A T A C G T T C A G A C T G C G A T C G T A C G T A A C G T C G A T A C G T
p-value:1e-8
log p-value:-1.871e+01
Information Content per bp:1.663
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif51.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets48.1 +/- 30.0bp
Average Position of motif in Background51.5 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F3/MA0788.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAATTACCAAATCCAT
AAATTAGCATAAT---
 T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAATTACCAAATCCAT
TAATTTGCATAA----
 T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAATTACCAAATCCAT
TAATTTGCATAA----
 T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAATTACCAAATCCAT
AAGGTAATTACCTAAT----
 A C G T A C G T A C G T A C G T T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T A C G T A C G T A C G T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAATTACCAAATCCAT
AAAGTAATTAGTGAAT----
 A C G T A C G T A C G T A C G T T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAATTACCAAATCCAT
-AATTTGCATANT---
 T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAATTACCAAATCCAT
GGAAATTCCC--------
 A C G T A C G T T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAATTACCAAATCCAT
--ATTTGCATA-----
 T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T

Hoxb5/MA0904.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAATTACCAAATCCAT
ACGGTAATTAGCTCAT----
 A C G T A C G T A C G T A C G T T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T A C G T A C G T A C G T

PH0060.1_Hoxb5/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAATTACCAAATCCAT
ACGGTAATTAGCTCAT----
 A C G T A C G T A C G T A C G T T C G A C G T A G T C A G A C T C G A T G C T A T A G C A G T C G T C A G C T A C T G A C A G T A G T C A T G C C G T A A G C T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T A C G T A C G T A C G T