Information for 16-TGAGTTGTTGCCC (Motif 22)

C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C
Reverse Opposite:
A C T G C A T G A C T G G T A C G T C A G T C A A T G C T C G A C G T A A G T C A G C T G T A C C G T A
p-value:1e-8
log p-value:-2.019e+01
Information Content per bp:1.688
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif73.4
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets46.1 +/- 29.2bp
Average Position of motif in Background50.5 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:TGAGTTGTTGCCC---
-------CTGCCCGCA
 C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGAGTTGTTGCCC
TGATTTATGGCC-
 C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAGTTGTTGCCC--
TGACCTTTTGACCTC
 C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGAGTTGTTGCCC-
GCGGAGGTGTCGCCTC
 A C G T A C G T C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGAGTTGTTGCCC------
---GGGTGTGCCCAAAAGG
 C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Rarg/MA0859.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTTGTTGCCC--
TTGACCTTTTGACCTT
 A C G T C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TGAGTTGTTGCCC---
-------ATGCCCACC
 C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTTGTTGCCC
NTGATTTATGGCC-
 A C G T C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

Rarb/MA0857.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGAGTTGTTGCCC---
TGACCTTTTGACCTTT
 C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGAGTTGTTGCCC
TGATTTATGGCC-
 C G A T A C T G C T G A T A C G G C A T A C G T T A C G A C G T C A G T A C T G A G T C G A T C G T A C
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T