Information for 10-TTSAAGTGTCTGC (Motif 10)

C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C
Reverse Opposite:
T A C G A G T C C G T A C T A G C T G A G T A C C G T A A T G C A C G T A C G T A T G C T G C A C G T A
p-value:1e-10
log p-value:-2.420e+01
Information Content per bp:1.772
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif39.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets53.2 +/- 19.6bp
Average Position of motif in Background47.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTSAAGTGTCTGC
NTCAAGTGG----
 C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TTSAAGTGTCTGC
-----CTGTCTGG
 C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTSAAGTGTCTGC
NTCAAGTGGN---
 C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTSAAGTGTCTGC-----
-NNTNNTGTCTGGNNTNG
 C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTSAAGTGTCTGC
---VBSYGTCTGG
 C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTSAAGTGTCTGC
-TTRAGTGSYK--
 C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTSAAGTGTCTGC----
-NNGCGTGTGTGCNGCN
 C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTSAAGTGTCTGC
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTSAAGTGTCTGC
-TTAAGTGCTT--
 C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTSAAGTGTCTGC
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T C G A T A C G T A T C G C G T A C G T A T A C G A C G T A C T G A G C T G A T C A C G T A C T G A G T C
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T