Information for 5-GCCCACAGCTMAG (Motif 9)

A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
Reverse Opposite:
A T G C A C G T A C G T G T C A A C T G A G T C A C G T A C T G A C G T A C T G A C T G A C T G A G T C
p-value:1e-11
log p-value:-2.637e+01
Information Content per bp:1.892
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 9.8bp
Average Position of motif in Background88.8 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCCCACAGCTMAG
---CACAGN----
A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCCACAGCTMAG
AAACCACAGC----
A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCCACAGCTMAG
NWAACCACADNN---
A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCACAGCTMAG
AAACCACAGAN---
A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCCACAGCTMAG
YCCGCCCACGCN----
A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCCACAGCTMAG
CTGCCCGCA------
A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCCACAGCTMAG
---AACAGCTG--
A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCCACAGCTMAG
NTGCCCANNGGTNA-
A C G T A C G T A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCCCACAGCTMAG-
----HCAGCTGDTN
A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G A C G T
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCCACAGCTMAG
---CGCAGCTGCG
A C T G A G T C A G T C A G T C C G T A A G T C C G T A A C T G A G T C A C G T T G A C G T C A A T C G
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G