Information for 3-TGAGTGCCATTSA (Motif 6)

A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A
Reverse Opposite:
A G C T A T C G G T C A C G T A A C G T A C T G A C T G A G T C C G T A A G T C C G A T A T G C C G T A
p-value:1e-13
log p-value:-3.108e+01
Information Content per bp:1.837
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.1 +/- 17.3bp
Average Position of motif in Background60.9 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTGCCATTSA
RGTTAGTGCCCY---
 A C G T A C G T A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGCCATTSA
BTGABTGACAGS--
 A C G T A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGCCATTSA
NTGATTGACAGN--
 A C G T A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGAGTGCCATTSA
--CGTGCCAAG--
 A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGAGTGCCATTSA-
----GGCCATTAAC
 A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A A C G T
A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTGCCATTSA
CTTGAGTGGCT----
 A C G T A C G T A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAGTGCCATTSA-
TTGAATGAAATTCGA
 A C G T A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

YY2/MA0748.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAGTGCCATTSA
-GTCCGCCATTA-
 A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGAGTGCCATTSA
----TGCCAA---
 A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGTGCCATTSA
NNNNTTGTGTGCTTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C T A G C G A T A C T G A G T C A G T C C G T A A C G T A C G T A T G C C T G A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T