Information for 2-GTGGGTCGGADCACGB (Motif 5)

A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T
Reverse Opposite:
T C G A A G T C A C T G C G A T A C T G G C A T A C G T A G T C A G T C C T A G C G T A A G T C A G T C A G T C C T G A A T G C
p-value:1e-14
log p-value:-3.248e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 19.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GTGGGTCGGADCACGB
------CGGAGC----
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGGGTCGGADCACGB
NNNNGGGGGAAGANGG
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GTGGGTCGGADCACGB
------GGGAGGACNG
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:GTGGGTCGGADCACGB--
----------GCACGTNC
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

PB0115.1_Ehf_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTGGGTCGGADCACGB-
-AAGATCGGAANTNNNA
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T A C G T
A C G T C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:GTGGGTCGGADCACGB--
----------GCACGTAY
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

PB0043.1_Max_1/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GTGGGTCGGADCACGB-------
-------TGACCACGTGGTCGGG
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

MLXIPL/MA0664.1/Jaspar

Match Rank:8
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:GTGGGTCGGADCACGB---
---------ATCACGTGAT
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T

MAX::MYC/MA0059.1/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GTGGGTCGGADCACGB---
--------GACCACGTGGT
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.51
Offset:10
Orientation:forward strand
Alignment:GTGGGTCGGADCACGB----
----------GCACGTACCC
 A T C G A G C T C T A G C T A G C T A G A C G T A G T C A C T G A C T G C G T A C G A T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C