Information for 3-GGGAGGATTK (Motif 3)

A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T
Reverse Opposite:
G T C A C G T A C G T A A C G T A T G C A G T C C A G T T G A C A G T C A T G C
p-value:1e-16
log p-value:-3.730e+01
Information Content per bp:1.738
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif7.38%
Number of Background Sequences with motif789.5
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets49.1 +/- 28.8bp
Average Position of motif in Background49.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGAGGATTK
GGGAGGACNG
 A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGGAGGATTK------
AGGGGGATTAGCTGCC
 A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGGAGGATTK--
--VRGGATTARN
 A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T A C G T A C G T
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGGAGGATTK-
---NGGATTAA
 A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T A C G T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGATTK-----
TGAGGGGGATTAACTAT
 A C G T A C G T A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGGAGGATTK
--NGGGATTA
 A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGGAGGATTK--
---GGGATTANN
 A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T A C G T A C G T
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGATTK-----
TGAGGGGGATTAACTAT
 A C G T A C G T A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGGAGGATTK--
----GGATTAGC
 A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGAGGATTK-
-CCWGGAATGY
 A T C G A C T G A C T G G T C A A C T G A T C G G T C A C G A T A C G T C A G T A C G T
A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C