Information for 6-AAAATGGYGGRKG (Motif 8)

C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
Reverse Opposite:
A G T C T G A C A G C T A G T C A G T C C T A G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.345e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.2 +/- 23.8bp
Average Position of motif in Background51.1 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AAAATGGYGGRKG
CAAGATGGCGGC--
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAAATGGYGGRKG
CAAGATGGCGGC--
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AAAATGGYGGRKG
-TAATGGCGGNC-
 C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGGYGGRKG---
NAGANTGGCGGGGNGNA
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AAAATGGYGGRKG
VRAACAATGG------
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGGYGGRKG
RACAAWGG------
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAATGGYGGRKG
RAACAATGGN-----
 A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGGYGGRKG
AACAAAGG------
 A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAAATGGYGGRKG
-----GGGGGGGG
 C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AAAATGGYGGRKG
NNTNNACAATGGGANNN-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C T G A C T G A G T C A C T G A C T G T C A G A C T G A C T G
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T