Information for 2-ACTSATTAACAGC (Motif 3)

G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
Reverse Opposite:
A C T G A G T C A C G T T A C G A C G T A C G T C G T A C G T A C G A T A T C G C G T A A C T G A C G T
p-value:1e-12
log p-value:-2.898e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 32.5bp
Average Position of motif in Background53.0 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0151.1_Pou6f1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----ACTSATTAACAGC
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0150.1_Pou4f3/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ACTSATTAACAGC-
GACNTCATTAATAANN
 A C G T A C G T G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ACTSATTAACAGC
AGCTCATTAT----
 A C G T G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACTSATTAACAGC
-GTAATTAA----
 G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACTSATTAACAGC
-CTAATTAA----
 G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACTSATTAACAGC
TTAATNATTAAC---
 A C G T A C G T G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ACTSATTAACAGC
--YCATTAMC---
 G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACTSATTAACAGC
CCTAATTAAA---
 G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACTSATTAACAGC
-CTAATTAA----
 G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
A C G T A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACTSATTAACAGC
ACTAATTAAA---
 G T C A G T A C A C G T A T C G C G T A A C G T A C G T C G T A C G T A A G T C C G T A C T A G G T A C
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T