Information for 13-TCATTAGACTGTA (Motif 19)

A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
Reverse Opposite:
A C G T C T G A A G T C C G T A A C T G A C G T A G T C A C G T C G T A C G T A A C G T C T A G C G T A
p-value:1e-7
log p-value:-1.811e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 27.4bp
Average Position of motif in Background51.0 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VAX2/MA0723.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCATTAGACTGTA
NTAATTAG------
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCATTAGACTGTA
GTAATTAG------
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCATTAGACTGTA
ACTAATTAGC-----
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T A C G T A C G T

VAX1/MA0722.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCATTAGACTGTA
NTAATTAG------
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCATTAGACTGTA
GGTAATTAGC-----
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

EMX1/MA0612.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCATTAGACTGTA
NNTAATTAGN-----
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G A C G T A C G T A C G T A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCATTAGACTGTA
AGTAATTAAC-----
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C A C G T A C G T A C G T A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCATTAGACTGTA
GGTAATTAGC-----
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCATTAGACTGTA
ACTAATTAAA-----
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCATTAGACTGTA
CCTAATTAAA-----
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G A T A C T G A G C T G T C A
G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T