Information for 8-GGACAGTAGCCCC (Motif 7)

A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G C T A G A C T G A G T C A G C T T C G A A G T C A C G T A C T G A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 24.8bp
Average Position of motif in Background30.4 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GGACAGTAGCCCC-
ATGTACAGTAGCAAAG
 A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GGACAGTAGCCCC-
ATTTACAGTAGCAAAA
 A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGACAGTAGCCCC-
ADGGYAGYAGCATCT
 A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGACAGTAGCCCC
AGGTCANTGACCTN
 A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGACAGTAGCCCC
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GGACAGTAGCCCC
CCAGGAACAG-------
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGACAGTAGCCCC
AGCAACAGCCGCACC
 A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGACAGTAGCCCC----
NNNNGGTACCCCCCANN
 A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGACAGTAGCCCC
-CACAGN------
 A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGACAGTAGCCCC
TTGACAG-------
 A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C G T C T G A A C T G A G T C A G T C A G T C G T A C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T