Information for 7-TGAAATTTGG (Motif 6)

A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G
Reverse Opposite:
A G T C G T A C T C G A G C T A T G C A A G C T C G A T A G C T G T A C C G T A
p-value:1e-10
log p-value:-2.420e+01
Information Content per bp:1.837
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif147.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets60.4 +/- 29.6bp
Average Position of motif in Background51.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TGAAATTTGG
TTGAATGAAATTCGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGAAATTTGG------
TGGACTTTGNNCTNTG
 A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGAAATTTGG-----
TGGACTTTGNNCTCN
 A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGAAATTTGG
CTGACCTTTG-
 A C G T A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGAAATTTGG--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGAAATTTGG
ACTGAAACCA--
 A C G T A C G T A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAATTTGG
GAAAGTGAAAGT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGAAATTTGG--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGAAATTTGG---
-GWAAYHTGABMC
 A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGAAATTTGG
NCTGGAATGC--
 A C G T A C G T A C G T A C T G C T G A C G T A T C G A A C G T C G A T A C G T A C T G A C T G
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T