Information for 6-CAGCGCCCCCGTG (Motif 4)

A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G
Reverse Opposite:
A G T C T C G A T A G C A C T G A C T G A C T G A C T G A C T G A G T C T A C G A G T C A C G T A C T G
p-value:1e-14
log p-value:-3.249e+01
Information Content per bp:1.830
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.7 +/- 21.4bp
Average Position of motif in Background40.2 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCGCCCCCGTG--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGCGCCCCCGTG
CAACGTCCGCGG-
 A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGCGCCCCCGTG----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGCGCCCCCGTG--
-TCCGCCCCCGCATT
 A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G A C G T A C G T
A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGCCCCCGTG
TGCCTGCGYCMCCTT-
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGCGCCCCCGTG
--AAGACCCYYN-
 A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAGCGCCCCCGTG
-----NCCACGTG
 A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAGCGCCCCCGTG--
---CGCCCCCTGACA
 A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGCGCCCCCGTG------
TAGCGCCCCCTGGTGGCCA
 A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGCCCCCGTG
GCTCCGCCCMCY--
 A C G T A G T C C G T A A C T G A G T C A C T G G T A C A G T C A G T C T A G C A G T C A C T G A C G T A C T G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T