Information for 5-CGCGGCTGCGCCCGGA (Motif 14)

G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
Reverse Opposite:
A C G T A G T C A G T C C A T G C A T G A C T G A G T C C T A G A G T C C T G A A C T G A G T C A G T C A C T G A G T C A C T G
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 19.1bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGCGGCTGCGCCCGGA
-GCGCCTGCGCA----
 G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCGGCTGCGCCCGGA
CGCAGCTGCG------
 G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGCGGCTGCGCCCGGA
CTCAGCAGCTGCTACTG--
 A C G T A C G T A C G T G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCGGCTGCGCCCGGA
GTGCGCATGCGC-----
 A C G T G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCGGCTGCGCCCGGA
CAGCAGCTGN-------
 A C G T G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCGGCTGCGCCCGGA
NNACAGCTGC-------
 A C G T G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGCGGCTGCGCCCGGA
-GCGCATGCGCAG---
 G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGCTGCGCCCGGA
NNAGCAGCTGCT------
 A C G T A C G T G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGCGGCTGCGCCCGGA
TGCAGCTGTCCCT---
 G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGCGGCTGCGCCCGGA
AGCAGCTGCT------
 G T A C C T A G A G T C C T A G C T A G A G T C A G C T A C T G G A T C T A C G A G T C G A T C G T A C C T A G T A C G T G C A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T