Information for 1-CTGTCTTGCA (Motif 1)

G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A
Reverse Opposite:
C G A T A C T G T G A C C G T A C G T A T A C G C G T A T G A C C G T A A C T G
p-value:1e-51
log p-value:-1.179e+02
Information Content per bp:1.748
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.22%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets51.3 +/- 25.2bp
Average Position of motif in Background59.6 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGTCTTGCA---
CTGTCTGTCACCT
 G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGTCTTGCA---
-TGTCTGDCACCT
 G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTGTCTTGCA-----
-----TTGCAACATN
 G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGTCTTGCA---
-GGGATTGCATNN
 G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTTGCA----
ANATTTTTGCAANTN
 A C G T G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTGTCTTGCA
NNGTANTGTTTTNC-
 A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTTGCA---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTGTCTTGCA
---TTTTCCA
 G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTGTCTTGCA-----
----ATTGCACAATA
 G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGTCTTGCA
CTGTCTGG--
 G T A C C G A T A C T G G C A T A T G C C G A T A C G T A C T G G T A C G C T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T