Information for 2-TGGCTCCTGGGAA (Motif 4)

A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A
Reverse Opposite:
A C G T A C G T G A T C A T G C G T A C C G T A A C T G T A C G C G T A A T C G G T A C A G T C C G T A
p-value:1e-9
log p-value:-2.251e+01
Information Content per bp:1.812
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif75.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.6 +/- 25.1bp
Average Position of motif in Background50.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGGCTCCTGGGAA--
RGSMTBCTGGGAAAT
 A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGGCTCCTGGGAA-
---CTTCTGGGAAA
 A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A A C G T
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGGCTCCTGGGAA--
----TTCTTGGAAAN
 A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TGGCTCCTGGGAA--
-----CSTGGGAAAD
 A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCCTGGGAA
TWGTCTGV------
 A C G T A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGGCTCCTGGGAA----
---TTTCCAGGAAATGG
 A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGGCTCCTGGGAA-
---TTTCCAGGAAA
 A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGCTCCTGGGAA--------
-GCATTCTGGGAATTGTAGTT
 A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGCTCCTGGGAA--
TGTTKCCTAGCAACM
 A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGGCTCCTGGGAA
---CTTCCNGGAA
 A C G T A C T G A C T G A T G C A C G T A T G C A G T C A C G T A C T G A T C G C A T G T C G A T C G A
A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A