Information for 2-CCCAGGGCTTTCCCAG (Motif 3)

A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A C T G A C T G C G T A G T C A C G T A A C T G A T G C A G T C A T G C C G A T A T C G A C T G T C A G
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.824
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 25.7bp
Average Position of motif in Background71.5 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:CCCAGGGCTTTCCCAG---
--------TTTCCCAGAAN
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCAGGGCTTTCCCAG
---GGGGATTTCC---
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CCCAGGGCTTTCCCAG-
-------HTTTCCCASG
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CCCAGGGCTTTCCCAG--
-------ATTTCCAAGAA
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:5
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CCCAGGGCTTTCCCAG---
--------TTTCCTGGAAA
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCCAGGGCTTTCCCAG
---GGGAATTTCC---
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCCAGGGCTTTCCCAG
-CNAGGCCT-------
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCCAGGGCTTTCCCAG---
-----NGCTTTCTAGGAAN
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCCAGGGCTTTCCCAG
---GGGGATTTCC---
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CCCAGGGCTTTCCCAG---
---------TGCCCAGNHW
 A G T C A G T C A T G C C G T A A T C G C T A G A T C G A G T C C G A T A C G T A C G T A G T C A G T C T G A C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A