Information for 2-GCATTTAACA (Motif 7)

A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A C G T G T C A C G T A G C T A A C G T A T C G A G T C
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.848
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif69.6
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets52.3 +/- 27.8bp
Average Position of motif in Background46.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0063.1_Hoxb8/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAACA--
ACCGGCAATTAATAAA
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCATTTAACA
GCACTTAA--
 A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAACA---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAACA---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCATTTAACA
NNCAATTANN-
 A C G T A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAACA---
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAACA---
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

Hmx2/MA0897.1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAACA---
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCATTTAACA---
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCATTTAACA
GCAATAAAAA
 A C T G A T G C C G T A C G A T C G A T A C G T G T C A C G T A G A T C C G T A
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A