Information for 1-CGGATAAAAG (Motif 4)

A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G
Reverse Opposite:
G T A C C G A T A C G T A C G T A C G T C G T A A G C T A G T C G A T C A C T G
p-value:1e-12
log p-value:-2.916e+01
Information Content per bp:1.855
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets55.1 +/- 32.4bp
Average Position of motif in Background58.8 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGGATAAAAG
CCYMATAAAA-
 A C G T A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGGATAAAAG-----
NANAGATCAAAGGGNNN
 A C G T A C G T A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGGATAAAAG-----
NNNAGATCAAAGGANNN
 A C G T A C G T A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGGATAAAAG
NCYAATAAAA-
 A C G T A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGATAAAAG
-AGATAAGA-
 A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGATAAAAG
-AGATAASR-
 A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T

PH0126.1_Obox6/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CGGATAAAAG
AAAAACGGATTATTG
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGATAAAAG
-AGATAAGA-
 A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G
A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGGATAAAAG
NBWGATAAGR-
 A C G T A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGGATAAAAG---
AAAGATCAAAGGAA
 A C G T A G T C C T A G A C T G C T G A C G A T G T C A C G T A G T C A C G T A A C T G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A