Information for 4-CAGCGAGTCT (Motif 14)

T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T
Reverse Opposite:
C T G A T C A G T C G A T A G C A G C T T A G C C A T G A G T C G C A T A T C G
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.656
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif444.5
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets50.3 +/- 25.4bp
Average Position of motif in Background52.2 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGAGTCT----
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGAGTCT
DCTCAGCAGG---
 A C G T A C G T A C G T T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGCGAGTCT
CAGCC-----
 T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAGCGAGTCT--
----TWGTCTGV
 T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGCGAGTCT--
--VBSYGTCTGG
 T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGAGTCT
CACAGN------
 A C G T A C G T T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGCGAGTCT------
-GGNGCGNCTGTTNNN
 T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGCGAGTCT
-AGCGCGCC-
 T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAGCGAGTCT-
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A C G T T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAGCGAGTCT---
TTGACCGAGAATTCC
 A C G T A C G T T A G C C G T A C T A G G T A C A T C G T C G A A T C G A G C T A G T C G A C T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C