Information for 14-CGCTAAGCGT (Motif 31)

A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T
Reverse Opposite:
C T G A A G T C A C T G A G T C A C G T A C G T C G T A C T A G A G T C A C T G
p-value:1e-9
log p-value:-2.132e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.9 +/- 24.2bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGCTAAGCGT-
-GCTAAACGGT
 A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGCTAAGCGT-
----AAGCTTG
 A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

MYBL1/MA0776.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCTAAGCGT
ACCGTTAACGGT
 A C G T A C G T A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGCTAAGCGT
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGCTAAGCGT-
-GCTAATTGCT
 A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T A C G T
A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CGCTAAGCGT
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGCTAAGCGT-
--CTAATCGNT
 A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T A C G T
A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGCTAAGCGT--
----AACCGANA
 A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CGCTAAGCGT
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGCTAAGCGT
-GCTAATCC-
 A G T C A C T G A G T C C G A T C G T A C G T A C T A G A G T C A C T G A G C T
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T