Information for 5-CGAAACCCAG (Motif 13)

A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T C T A G A C T G A C T G A G C T A C G T A C G T A G T C A C T G
p-value:1e-12
log p-value:-2.873e+01
Information Content per bp:1.895
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.8 +/- 23.5bp
Average Position of motif in Background74.2 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CGAAACCCAG--
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------CGAAACCCAG
ATAAACCGAAACCAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CGAAACCCAG
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:4
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------CGAAACCCAG
CAAAATCGAAACTAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGAAACCCAG
ACTGAAACCA--
 A C G T A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGAAACCCAG---
TCGAAACCGAAACT
 A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G A C G T A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

IRF9/MA0653.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGAAACCCAG---
AACGAAACCGAAACT
 A C G T A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G A C G T A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGAAACCCAG
GCCACACCCA-
 A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CGAAACCCAG
GAGAACCGAAACTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGAAACCCAG
GGCCACACCCA-
 A C G T A C G T A G T C A C T G G T C A C G T A C T G A A G T C A G T C A G T C C G T A A T C G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T