Information for 5-CCARGAAAAAGAAGST (Motif 12)

A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
Reverse Opposite:
T G C A A T C G A T G C A C G T A C G T A T G C A G C T G A C T A G C T G C A T A G C T A G T C A G C T A C G T A T C G A C T G
p-value:1e-12
log p-value:-2.882e+01
Information Content per bp:1.710
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.7 +/- 32.3bp
Average Position of motif in Background61.8 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CCARGAAAAAGAAGST
----GAAACTGAAACT
 A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCARGAAAAAGAAGST--
---GGAAANTGAAACTNA
 A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF7/MA0772.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCARGAAAAAGAAGST
--ACGAAAGCGAAAGT
 A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CCARGAAAAAGAAGST
----GAAAGTGAAAGT
 A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCARGAAAAAGAAGST
----GAAAMTGAAACT
 A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCARGAAAAAGAAGST
TTTCCAGGAAATGG-----
 A C G T A C G T A C G T A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCARGAAAAAGAAGST
----GAAASYGAAASY
 A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCARGAAAAAGAAGST
TTTCCTGGAAAGNNN----
 A C G T A C G T A C G T A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCARGAAAAAGAAGST
ATTTCCAAGAA---------
 A C G T A C G T A C G T A C G T A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCARGAAAAAGAAGST
NTTTCCNGGAAA--------
 A C G T A C G T A C G T A C G T A G T C A T G C T G C A C T G A A C T G C T G A C G T A C T G A C T G A T C G A A T C G T G C A C G T A A T C G A T G C A C G T
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T