Information for 9-KTCTGTCASSAAA (Motif 13)

A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A T C G A T C G A C G T A C T G C G T A G T A C C G T A C T A G C G T A G T C A
p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.886
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.8 +/- 17.9bp
Average Position of motif in Background45.8 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:KTCTGTCASSAAA
--NTGTCAN----
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:KTCTGTCASSAAA
VGCTGWCAVB---
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:KTCTGTCASSAAA
-GCTGTCAA----
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-KTCTGTCASSAAA
TGTCTGDCACCT--
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:KTCTGTCASSAAA
-SCTGTCARCACC
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:KTCTGTCASSAAA
-CCTGTCAA----
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-KTCTGTCASSAAA---
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:KTCTGTCASSAAA
--YTGWCADY---
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--KTCTGTCASSAAA
CTGTCTGTCACCT--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:KTCTGTCASSAAA
-TGAGTCAGCA--
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A T A C G A T G C C G T A C G T A C T G A
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T