Information for 16-GGGTTTTAATTGA (Motif 28)

A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A
Reverse Opposite:
A G C T G T A C G C T A C T G A A G C T A C G T G T C A C G T A C G T A C T G A G A T C A G T C G T A C
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.757
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif52.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets60.2 +/- 25.4bp
Average Position of motif in Background48.0 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTTTTAATTGA----
NNNTTTTAATTAANNNN
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GGGTTTTAATTGA
----TTTAAT---
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GGGTTTTAATTGA
--ATTTGAATT--
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGTTTTAATTGA----
NNTTTTTAATTAATTCG
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A A C G T A C G T A C G T A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGTTTTAATTGA---
NNANTTTTATTGGNNN
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Hoxd9/MA0913.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGGTTTTAATTGA
---TTTTTATTGC
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A
A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GGGTTTTAATTGA-
----TTTAATTGCN
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGGTTTTAATTGA----
AGTTTTTAATTAATTTG
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A A C G T A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGTTTTAATTGA---
NNAATTTTATTGGNTN
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGTTTTAATTGA
--ATATTAATTAA
 A C T G C T A G C T A G A G C T A C G T A C G T A C G T G T C A C T G A A G C T C A G T A C T G C T G A
A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A