Information for 2-CAAGATGGCGGCC (Motif 2)

G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C
Reverse Opposite:
T A C G C A T G A T G C T A G C A C T G A G T C A G T C C G T A A C G T A G T C C G A T A G C T C A T G
p-value:1e-15
log p-value:-3.482e+01
Information Content per bp:1.773
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif79.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets49.4 +/- 23.2bp
Average Position of motif in Background52.1 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCGGCC
CAAGATGGCGGC-
 G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CAAGATGGCGGCC
CAAGATGGCGGC-
 G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CAAGATGGCGGCC
--TAATGGCGGNC
 G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAGATGGCGGCC----
-AAAATGGCGCCATTTT
 G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAAGATGGCGGCC-----
AAAAATGGCGCCATTTTT
 G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAAGATGGCGGCC
AACAGATGGC----
 A C G T G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAAGATGGCGGCC----
NAGANTGGCGGGGNGNA
 G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CAAGATGGCGGCC-
------GGCGCGCT
 G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAAGATGGCGGCC---
-ATAAGGGCGCGCGAT
 G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C A C G T A C G T A C G T
A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAAGATGGCGGCC
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T G A T C C T G A C G T A C T A G G T C A C G A T A C T G A C T G A G T C A T C G A T C G G A T C A T G C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G