Information for 11-TCACGACGGA (Motif 17)

A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A
Reverse Opposite:
C A G T A G T C A G T C C A T G A G C T A T G C C A T G C A G T T A C G T G C A
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.662
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.61%
Number of Background Sequences with motif1316.4
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets48.1 +/- 28.9bp
Average Position of motif in Background49.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCACGACGGA
NGTCCCNNGGGA
 A C G T A C G T A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TCACGACGGA
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

EBF1/MA0154.3/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCACGACGGA--
ATTCCCAAGGGAAT
 A C G T A C G T A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A A C G T A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

Mitf/MA0620.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCACGACGGA
GGTCACGTGG--
 A C G T A C G T A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCACGACGGA
-AACAAAGG-
 A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCACGACGGA
AGTCACGC----
 A C G T A C G T A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCACGACGGA----
----DCCGGAARYN
 A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G

PH0077.1_Hoxd12/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TCACGACGGA-
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCACGACGGA
NTTTTACGAC---
 A C G T A C G T A C G T A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCACGACGGA----
ATTTACGACAAATAGC
 A C G T A C G T A C G T A T G C G T C A G T A C T A C G T C G A G T A C T C A G T C A G G T C A A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C