Information for 1-TCAGTRCTGCCCC (Motif 2)

A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C
Reverse Opposite:
C T A G T A C G C T A G T C A G G T A C C G T A C A T G G A C T C G T A A G T C C G A T A C T G C G T A
p-value:1e-12
log p-value:-2.874e+01
Information Content per bp:1.712
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.55%
Number of Background Sequences with motif149.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets58.0 +/- 19.2bp
Average Position of motif in Background50.8 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAGTRCTGCCCC-----
--GGGTGTGCCCAAAAGG
 A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TCAGTRCTGCCCC--
------ATGCCCACC
 A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TCAGTRCTGCCCC--
------CTGCCCGCA
 A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTRCTGCCCC
TTAAGTGCTT----
 A C G T A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCAGTRCTGCCCC
-CNGTCCTCCC--
 A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCAGTRCTGCCCC--
-NAGCCCCGCCCCCN
 A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C A C G T A C G T
A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCAGTRCTGCCCC
--NNNANTGA---
 A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCAGTRCTGCCCC---
ANANNTGATACCCNATN
 A C G T A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TCAGTRCTGCCCC-----
--ATCCCCGCCCCTAAAA
 A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TCAGTRCTGCCCC-
--KGCCCTTCCCCA
 A C G T G T A C C G T A C T A G G C A T C T G A G T A C A C G T A C T G A G T C G A T C A G T C G A T C A C G T
A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A