Information for 10-MCCTATATTGTCGTTA (Motif 15)

T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A
Reverse Opposite:
G A C T C G T A C G T A G A T C C T A G C G T A A T G C C G T A C G T A A C G T G C T A C G A T C G T A C T A G C A T G A C G T
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.702
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 25.0bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:MCCTATATTGTCGTTA-
-AANTTATTGTTCTNNA
 T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A A C G T
A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:MCCTATATTGTCGTTA--
--TTCAATTGTTCTAAAA
 T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:MCCTATATTGTCGTTA--
----TAATTGTTCTAAAC
 T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:MCCTATATTGTCGTTA-
-NNTTTATTGTTCTNNN
 T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A A C G T
A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:MCCTATATTGTCGTTA-
GTATCTATTGTTCTTTA
 T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---MCCTATATTGTCGTTA---
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:MCCTATATTGTCGTTA
---CTCATTGTC----
 T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:MCCTATATTGTCGTTA
-CTAATATTGCTAAA-
 T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:MCCTATATTGTCGTTA
-CTAATATTGCTAAA-
 T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:MCCTATATTGTCGTTA-
---AAAATTGTTATGAA
 T G C A G T A C A G T C C G A T C G T A C G A T C G T A C G A T A C G T A T C G G A C T A G T C C T A G A C G T A C G T C G T A A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A