Information for 2-CACAATGTRTGCAGTA (Motif 6)

G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A
Reverse Opposite:
A C G T C G T A A G T C C G A T C T A G A G T C C G T A A G T C C G T A A T G C C G T A C A G T C G A T A T C G A C G T A C T G
p-value:1e-11
log p-value:-2.713e+01
Information Content per bp:1.725
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.6 +/- 19.9bp
Average Position of motif in Background78.9 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACAATGTRTGCAGTA
-CCATTGTATGCAAAT
 G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CACAATGTRTGCAGTA----
---NSTGTTTRCWCAGBNNN
 G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CACAATGTRTGCAGTA-----
------GTCWGCTGTYYCTCT
 G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CACAATGTRTGCAGTA-----
----NNNANTGCAGTGCNNTT
 G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CACAATGTRTGCAGTA
GVACAGNMTGTYCTB--
 A C G T G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CACAATGTRTGCAGTA
NNNNTTGTGTGCTTNN
 G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CACAATGTRTGCAGTA
VAGRACAKWCTGTYC----
 A C G T A C G T A C G T G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CACAATGTRTGCAGTA
AGNACANNNTGTNCTN--
 A C G T A C G T G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CACAATGTRTGCAGTA
GHWACAWTGTWDCWA---
 A C G T A C G T G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A A C G T A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CACAATGTRTGCAGTA
-----TGTTTACH---
 G T A C C G T A A T G C G C T A G C T A C G A T A T C G A C G T C T A G C G A T C T A G A G T C C G T A A C T G G C A T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T A C G T