Information for 8-ATGYKATAAC (Motif 29)

C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C
Reverse Opposite:
A C T G A G C T A C G T C G T A G C A T T G A C C T A G A G T C G T C A A G C T
p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.614
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif10.91%
Number of Background Sequences with motif1820.9
Percentage of Background Sequences with motif4.68%
Average Position of motif in Targets52.1 +/- 27.8bp
Average Position of motif in Background50.8 +/- 42.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TP73/MA0861.1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATGYKATAAC-----
GACATGTCTGGACATGTC
 A C G T A C G T A C G T C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C A C G T A C G T A C G T A C G T A C G T
C A T G T C G A A G T C C T G A C G A T T A C G G A C T G A T C A G C T C T A G C T A G C T G A A G T C C G T A G A C T A T C G G A C T G T A C

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ATGYKATAAC-----
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T A C G T C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----ATGYKATAAC-----
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A C G T A C G T A C G T C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATGYKATAAC
AGATGCAATCCC
 A C G T A C G T C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PB0109.1_Bbx_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATGYKATAAC-----
NNNNCTGTTAACNNTNN
 A C G T A C G T C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C A C G T A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----ATGYKATAAC
NTGGAATGTG-----
 A C G T A C G T A C G T A C G T A C G T C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATGYKATAAC-----
ATGTCACAACAACAC
 C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C A C G T A C G T A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGYKATAAC
AGGTGTTAAT
 C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATGYKATAAC
NATGTTGCAA-
 A C G T C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATGYKATAAC-
TATGCWAATBAV
 A C G T C T G A C A G T T C A G G A T C A C T G C G T A G C A T T G C A T C G A T G A C A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G