Information for 7-CTAGCAGCTA (Motif 28)

G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A
Reverse Opposite:
A C G T T C G A A C T G T G A C C G A T C T A G G T A C A C G T G T C A A C T G
p-value:1e-7
log p-value:-1.681e+01
Information Content per bp:1.711
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif4.45%
Number of Background Sequences with motif389.4
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets49.0 +/- 23.5bp
Average Position of motif in Background49.2 +/- 40.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTAGCAGCTA--
--AGCAGCTGCT
 G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A A C G T A C G T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTAGCAGCTA-----
NNNNAGCAGCTGCTGAN
 A C G T A C G T G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTAGCAGCTA--
--CGCAGCTGCG
 G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A A C G T A C G T
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTAGCAGCTA
-TGACACCT-
 G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTAGCAGCTA--
NNAGCAGCTGCT
 G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A A C G T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTAGCAGCTA
--ANCAGCTG
 G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTAGCAGCTA-
-CAGCAGCTGN
 G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A A C G T
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTAGCAGCTA
SCCTAGCAACAG
 A C G T A C G T G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTAGCAGCTA-
-BAACAGCTGT
 G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A A C G T
A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAGCAGCTA---
--GACAGCTGCAG
 G T A C A C G T T C G A A C T G G A T C C G T A A C T G G T A C A C G T G T C A A C G T A C G T A C G T
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G