Information for 9-CVTGTGTCCCTGTGAB (Motif 23)

A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C
Reverse Opposite:
T A C G A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C T G G T C A A G T C C T G A A G T C C G T A A G T C C T A G
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.817
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 17.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CVTGTGTCCCTGTGAB----
----TGACCCAGTGACCTAC
 A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CVTGTGTCCCTGTGAB
--BNTGDCCTTG----
 A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CVTGTGTCCCTGTGAB
------KCCACGTGAC
 A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CVTGTGTCCCTGTGAB
RTCATGTGAC--------
 A C G T A C G T A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CVTGTGTCCCTGTGAB-----
-GTAGGTCACGGTGACCTACT
 A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CVTGTGTCCCTGTGAB
----TGACCTTGAV--
 A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CVTGTGTCCCTGTGAB
----TGACCTTGAN--
 A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CVTGTGTCCCTGTGAB---
-NAGTTTCABTHTGACTNW
 A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CVTGTGTCCCTGTGAB-
------GTCATGTGACC
 A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CVTGTGTCCCTGTGAB
NNGCGTGTGTGCNGCN---
 A C G T A C G T A C G T A G T C T A C G A C G T A C T G A G C T A C T G A C G T A G T C G T A C G T A C A C G T A C T G C G A T A C T G C G T A A G T C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T